TDEC provides a full-featured drug searching management function to facilitate members to compare or search data in the system. There are six categories of searching function items, including (1) Search by Basic Data, (2) Search by Bioactivity Data, (3) Search by Chemical Structure, (4) Search by Physicochemical Properties, (5) Matching Drug and Investigator Search, and (6) Drug Search Matched by Other Investigators
(1) Search by Basic Data
Search by Basic Data on drug samples includes the query function of TDEC ID, Drug Category, Drug Sample Chinese/ English Name, CAS. No, IUPAC, Scientific Name, Plant Parts, and Extracting Solvent.
(2) Search by Bioactivity Data
Search by Bioactivity Data function provide the following searching items, including: Anti-inflammatory Activity, Anti-allergic Activity, Anti-hepatitis Activity, Anti-diabetic Activity, Anti-cancer Activity, Anti-viral Activity, and BBB Transport Ability.
(3) Search by Chemical Structure
TDEC provides the online Marvin JS structural drawing board system and 3D preview service which are both developed by ChemAxon to facilitate the user to draw the chemical structure and operate the structure query function of the compound that user wants to query [1]. Marvin JS provides convenient and fast chemical structure drawing functions. In addition to drawing chemical structure graphics on the artboard, users can also import the files that you want to query directly from the outside via import function. Marvin JS also offers a number of chemical structure re-export functions, including two-dimensional (2D) chemical structure files and image files (png), such as cdx, mol, and sdf.
TDEC uses the Hosted Structure Searching Function developed by ChemAxon to provide TDEC members with structural similarity searching function, including: Similarity (similarity query, value 0.1~1.0), Substructure (substructure query), and Exact (complete structure query). In this function, TDEC searches the compounds in our database by SMILES notations, and list the searching results by the order of similarity. Firstly, members draw the structure they want to query on the online Marvin JS structure drawing board and then select the query type of structure (Similarity / Substructure / Exact) to perform the structural query. Subsequently, when members submit the compounds to our catalog, TDEC validates their SMILES notation first, and then upload our catalog to Chemicalize for utilizing structure search service to build database and index for our similarity search. In addition, TDEC provides eight query conditions for members to flexibly use the structural query together, including the basic information of the compound: TDEC ID, Name (English name), CAS, SMILES and InChI; Physiochemical Properties: Molecular Weight, Solubility Category and Lipinski's Rule of Five. It is convenient for members to quickly use the structural information to find the drug sample data they want.
(4) Physicochemical Properties Search
TDEC provides a Physicochemical Properties Search function that enables users to simultaneously retrieve both physicochemical and ADMET characteristics of small molecules.
In the Physicochemical Properties category, TDEC includes commonly used molecular descriptors such as the number of rotatable bonds (nRot), acid dissociation constant (pKa), and octanol–water partition coefficient (logP).
In the ADMET (Absorption, Distribution, Metabolism, Excretion, and Toxicity) section, the platform provides key pharmacokinetic parameters, including Caco-2 permeability, MDCK permeability, and human intestinal absorption (HIA).
Example:If researchers wish to screen for small molecules with high membrane permeability, good intestinal absorption, and low toxicity, the following search conditions can be specified:
- Caco-2 Permeability : True
- MDCK Permeability : True
- HIA : True
- Human Hepatotoxicity : True
The system will automatically list purified compounds that meet these criteria, enabling users to quickly identify potential drug-like candidates.
Through TDEC’s Physicochemical Properties Search function, researchers can efficiently perform multi-criteria filtering based on physicochemical and ADMET features, thereby enhancing the speed and precision of natural product–based drug discovery.
(5) Matching Drug and Investigator Search
TDEC provides Matching Drug and Investigator Search function. The system keeps the individual matching and searching records once members make the drug and investigator search
(6) Drug Search Matched by Other Investigators
TDEC provides Drug Search Matched by Other Investigators function. The system keeps the matched records once other investigators make a search of your drug.